The two phrases with must are actually quite different.
He must be working:
I am expressing certainty that he is currently working.
He must work:
In general, work is something he has to do.
The two phrases with will are similar, with only a subtle difference.
He will be coming:
I am expressing certainty that he will come, and am considering that action (of him coming) as continuous; that is, I am thinking of it happening over some time period.
This suggests certainty that his transit will occur.
He will come:
I am expressing certainty that he will come, and am considering that action (of him coming) as discrete; that is, it is one complete action in my mind.
This suggests certainty that his arrival will occur.