The best rule of thumb I know is that you use the when you're talking about a specific entity and you expect your hearers/readers to know which one you're talking about, because
you've already identified which one you're talking about ...
There's a problem here. The problem is that ...
you're about to identify which one you're talking about in the current or next phrase ...
The problem I want to address today is ...
The Irish problem ...
there's only one you're likely to be talking about ...
The President said today that ...
EXCEPT: You do not use the with a proper name (unless The is part of the name: The Prelude, by Wordsworth) or with name-like designations such as 'page 1', '1920'.
The conventions get tricky here—for instance, you do say the Mississippi River and the first page and the 1920s —and there are a few other places where the is called for. But I think you'll find this rule covers most cases.
In your example, for instance, it appears that you are not talking about a specific group of scientific papers but of scientific-papers-in-general, so you should not use the:
If you enjoy scientific papers you will want to get hold of the next edition of our journal.
But if you are narrowing the context to a specific group, you do use the:
If you enjoyed the papers you heard today you will want to get hold of the next edition of our journal.